Just thought I'd give an update on this one, cleaned some more, retraced the lines, and the one I though was missing was actually just me having probed the wrong via
programmed a unibios and the thing booted up to cross-hatch test, inserted a game and it fired up, so seem to be ok. Tried the second slot - there it seem there is some "black bars" thru the neo-geo logo, and the sound seem to be missing when using slot 2 - not sure what that would indicate but at least it seem to be somewhat operational.
Also did a run with a diagnostic rom - I'v just booted that without any cartridge in the slot so not sure if that means it does all the tests or not, but it comes up with all test passed - is there more tests this one will do ? (have't hooked up a controller yet so realy haven't been able to dig around much)